Samuel L. Foley, Ph.D.


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Postdoctoral Researcher

Theoretical/Computational Membrane Biophysics
T.C. Jenkins Department of Biophysics
Johns Hopkins University


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I am a postdoc in the Department of Biophysics at Johns Hopkins University, in the group of Margaret Johnson. I am currently working on the kinetics of cargo capture during the early stages of clathrin-mediated endocytosis, as well as using kinetic modeling to assess the relative contribution of surface localization to the enhancement of enzyme activity.


Previously, I was a graduate student in the Deserno group at Carnegie Mellon, where I learned to leverage theoretical and computational tools to study lipid membranes. In my thesis work, I developed a modification of the utra-coarse-grained Cooke lipid model rendering it capable of simulating bilayers with differing tensions in the two monolayers, a state known as "differential stress". I then put this model to work investigating how differential stress alters first-order phase transitions in lipid membranes, shedding light on the recently-discovered "stiffening transition" observed in membrane simulations. I also developed a coarse-grained simulation technique (which we like to call membrane "sticky tape") to allow the simulation of asymmetric lipid bilayers with simltaneous area- and curvature-relaxation.


Contact


sfoley13 (at) jhu (dot) edu


Publications


Foley, S. & Deserno, M. (2024). Asymmetric Membrane "Sticky Tape" Enables Simultaneous Relaxation of Area and Curvature in Simulation. Journal of Chemical Physics. (DOI) (Preprint) (SI)


Foley, S., Varma, M., Hossein, A., & Deserno, M. (2023). Elastic and Thermodynamic Consequences of Lipid Membrane Asymmetry. Emerging Topics in Life Sciences. (DOI) (Email me for a pre-print)


Foley, S., Hossein, A., & Deserno, M. (2022). Fluid-Gel Coexistence in Lipid Membranes under Differential Stress. Biophysical Journal. (DOI) (Preprint) (SI)


Foley, S. & Deserno, M. (2020). Stabilizing Leaflet Asymmetry under Differential Stress in a Highly Coarse-Grained Lipid Membrane Model. Journal of Chemical Theory and Computation. (DOI) (Preprint) (SI)





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